OrsSegmentationWizard_9d380f1a93c611e9ac0ec86000a21918

author:ORSTeam
contact:http://theobjects.com
email:info@theobjects.com
organization:Object Research Systems (ORS), Inc.
address:460 Ste-Catherine Ouest, suite 600, Montréal, Québec, Canada, H3B 1A7
copyright:Object Research Systems (ORS), Inc. All rights reserved 2018.
date:Jun 20 2019 21:48
dragonflyVersion:
 4.1.0.643 (D)
UUID:9d380f1a93c611e9ac0ec86000a21918

Class Code

class OrsPythonPlugins.OrsSegmentationWizard_9d380f1a93c611e9ac0ec86000a21918.OrsSegmentationWizard_9d380f1a93c611e9ac0ec86000a21918.OrsSegmentationWizard_9d380f1a93c611e9ac0ec86000a21918(varname=None)
CONTEXT_OBJECT_SOURCE_DATASET = 'SourceDataset'
FACTOR = 16
OrsHandleSegmentationFrameEditActivation()
OrsStateSegmentationFrameEdit = 'OrsStateSegmentationFrameEdit'
OrsSwitchToNexImageModality()
OrsSwitchToNextSegmentationFrame()
OrsSwitchToPrevImageModality()
OrsSwitchToPrevSegmentationFrame()
PLUGIN_ORSBASICMANIPULATE = 'OrsBasicManipulate'
PLUGIN_ORSBUSYNESSMANAGER = 'OrsBusynessManager'
PLUGIN_ORSCLIPBOXMANIPULATOR = 'OrsClipBoxManipulator'
PLUGIN_ORSHIGHLIGHTMANAGER = 'OrsHighlightManager'
PLUGIN_ORSLEGENDMANIPULATOR = 'OrsLegendManipulator'
PLUGIN_ORSSTATESELECTOR = 'OrsStateSelector'
PLUGIN_ORSTEXTPRESENTERMANAGER = 'OrsTextPresenterManager'
PLUGIN_ORSVOLUMEROIPAINTER = 'OrsVolumeROIPainter'
PLUGIN_ORSVOLUMEROITOOLS = 'OrsVolumeROITools'
PLUGIN_ORSWINDOWLEVELING = 'OrsWindowLeveling'
UIDescriptors = [<ORSServiceClass.OrsPlugin.uidescriptor.UIDescriptor object>]
applyInputUpdates(editActions)
canBeGenericallyOpened = False
canChangeLabelsCount()
canExportLabels()
can_predict() → bool
can_train() → bool
cleanup()

Deletes the variables managed by the plugin. It is the place to remove callbacks and other references to Python objects that would prevent them to be garbage collected. This method is called during the process of deletion of the plugin. It calls for the cleanup and deletion of the forms.

classmethod contextualMenu(listSelectedObjectsRepr)
exportCurrentGroup(filePath)
interfacemethod extractObjectFromContextGroup(aContextGroup, anObjectToExtract)

Extracts an object from a context group by making a copy.

Parameters:
Returns:

extractedObject (ORSModel.ors.Managed) – extracted object
fillFrameFromPredictions(frameIDs: List[str], modelID=None)
generateStrategyModels(inTraining: bool)
getAllLabelsMultiROI()
getClassesCount()
classmethod getContextName()
getCurrObjVisualVolume()
getCurrentFrame() → OrsPythonPlugins.OrsSegmentationWizard_9d380f1a93c611e9ac0ec86000a21918.segmentationframe.segmentationframe.SegmentationFrame
getCurrentModalityIdx()
getCurrentModelsCount()
getEditFrameState()
getIsObjectAvailable(anObject)

Gets to know if the object is available in the context.

Parameters:anObject (ORSModel.ors.Managed) – an object
Return:True if the object is available in the context; False otherwise.
Rtype:bool
classmethod getMainFormClass()

Gets the class of the main form

Returns:output –
getMainView()
getModalityCount()
getModalityNames()
getModelDuplicatesEnabled()
getPredictionViewsCount()
getSelectedFrameIDs() → List[OrsPythonPlugins.OrsSegmentationWizard_9d380f1a93c611e9ac0ec86000a21918.segmentationframe.segmentationframe.SegmentationFrame]
getSourceDataset(idx=0) → ORSModel.ors.Channel
getSourceDatasetsList() → List[ORSModel.ors.Channel]
getSourceGuidList() → List[str]
getStrategyManager()
getTitle()
getTotalFramesCount()
getTrainingDataset(progress)
getTrainingVoxelsCount()
getUseClassWeights()
classmethod getWizardGroupInstances()
get_global_box()
get_selected_view_model_ID()
handleTriggered(eventdata)

This method is called on every user input (mouse move, mouse click, key press, …) when the current state of the application is one of those declared by the plugin. This method can be used to perform specific tasks even if no action is currently in progress.

Parameters:eventData (OrsEvent.eventdata.InputEventData) – the event data
hidePredictions()
iterFramePredictionsInViews(frameID)
iterPredictionsInViews(visibleOnly=True)
keepAlive = False
modalContext = True
multiple = True
nextFrame()
nextModality()
onImageModalityMoved(fromIdx, toIdx)
onImageModalityRenamed(idx, name)
on_frame_added(frameID)
on_frame_edited(frameID)
on_frames_removed(frameIDs)
on_labels_settings_updated()
on_model_renamed(model_id)
on_model_visibility_changed(modelID)
on_models_count_limit_changed(new_limit)
on_models_removed(modelIDs: List[str])
on_opacity_value_changed(opacity)
on_prediction_view_action(predictionView)
predict(modelID=None, frameIDs=None)
prevFrame()
prevModality()
privateObjects = True
refreshAllViews()
refreshModelsList()
removeModelPredictions(modelIDs: List[str])
resetHandler()
restrictPlugins = True
savable = True
save_to_group(aContextGroup)
setCurrentModalityIdx(idx)
setFramePredictionsVisibility(frameID, isVisible)
setFrameVisibilityForCurrentModality(frame, isVisible=True)
setModelCountLimit(limit)
setPredictionsViewLayout()
set_source_guid_list(guid_list)
setupContext(openMainForm=True)

Performs the tasks to setup the context. This is normally done after the instantiation of the main plugin in context and setting his state.

These are the usual tasks:

  • instantiate all required plugins;
  • define context restrictions (actions, states, …);
  • open the main window with the mainform of the main plugin in context and all plugin forms
    (if openMainForm is True);
  • initialize the menu (if wanted);
  • perform any other task to initialize the context (configure views, text presenters, …).
Parameters:openMainForm (bool) – True to use the forms; False otherwise.
showCurrentPredictions(reselect_model=False)
showModelPredictions(modelIDs)
classmethod startupDefault(openMainForm=True)

Creates an instance of the plugin class and opens the main form (if required) at the default position.

Returns:output (AbstractPlugin) – plugin instance
classmethod startupFromChannels(channelList, openMainForm=True)
classmethod startupFromContextGroup(aContextGroup, openMainForm=True)
stateDescriptors = [<ORSServiceClass.OrsPlugin.statedescriptor.StateDescriptor object>]
classmethod toolsMenu()
train(train_distributed: bool = False)
updateAllModelsClassesInfo()
updateCurrentModality(step)
updateFrameSelection(step)
updateFrameSelectionInUI(frameID, isSelected)
updateFramesSelectionInView(selectedFrameIds, unselectedFrameIds)
updateModelClassesInfo(model)
updatePredictionsViewLayout()
update_plugins_post_layout_change()