CompareSegmentations_09e9ed76990111e9adec0c9d9276653a

Plugin for comparision of StructuredGrids -ROI, MultiROI, Channel

author:ORS Team
contact:http://theobjects.com
email:info@theobjects.com
organization:Object Research Systems (ORS), Inc.
address:460 Ste-Catherine Ouest, suite 600, Montréal, Québec, Canada, H3B 1A7
copyright:Object Research Systems (ORS), Inc. All rights reserved 2021.
date:Jun 27 2019 13:28
dragonflyVersion:
 4.1.0.11300
UUID:09e9ed76990111e9adec0c9d9276653a

Class Code

class OrsPythonPlugins.CompareSegmentations_09e9ed76990111e9adec0c9d9276653a.CompareSegmentations_09e9ed76990111e9adec0c9d9276653a.CompareSegmentations_09e9ed76990111e9adec0c9d9276653a(varname=None)
UIDescriptors = [<ORSServiceClass.OrsPlugin.uidescriptor.UIDescriptor object>]
compare()
interfacemethod compareWithGroundTruth(goldStandardStructuredGrid: ORSModel.ors.StructuredGrid, aStructuredGridtoCompare: ORSModel.ors.StructuredGrid, mask: ORSModel.ors.ROI, metrics: list = None, epsilon: float = 1e-10, progress: ORSModel.ors.Progress = None) → list

Nd Compares the ground truth (gold standard) and the test Calculating various statistical measures. Return a list of dict (one global dict plus one dict by label for ROI/MultiROI)

Parameters:
Returns:

res (dict) [count=[0, None]] – listOfMetricsDict
classmethod compareWithParameters(goldStandardStructuredGrid: ORSModel.ors.StructuredGrid, aStructuredGridtoCompare: ORSModel.ors.StructuredGrid, mask: ORSModel.ors.ROI, metrics: list = None, progress: ORSModel.ors.Progress = None)
interfacemethod compareWithoutGroundTruth(aStructuredGridtoEvaluate: ORSModel.ors.StructuredGrid, mask: ORSModel.ors.ROI, metrics: list = None, progress: ORSModel.ors.Progress = None) → list

Evaluate the image quality for aStructuredGridToCompare. Calculating various statistical measures. Return a list of dict.

Parameters:
Returns:

res (dict) [count=[0, None]] – listOfMetricsDict
classmethod compute_confusion_matrix_with_mask(ground_truth_arr, prediction_arr, labels, mask_value, patch_size=256)
classmethod contextualMenu(context)
getIsUsingGroundTruth() → bool
getIsValidParameters()
classmethod getMainFormClass()

Gets the class of the main form

Returns:output –
getManagedClass()
getMask() → ORSModel.ors.ROI
getMetricClassList()
classmethod getMetricClassListWithManagedClass(managedClass, withGroundTruth=True)
getMetricList()
classmethod getMetricListWithManagedClass(managedClass, withGroundTruth=True)
classmethod getMetricTooltips()
getObjectToCompareGUIDList() → list
getSavedMetricList()
classmethod getSavedMetricListWithManagedClass(managedClass, withGroundTruth=True)
getSelectedMetrics() → list
getShowGroundTruthCombobox()
getStructuredGridGroundTruth() → ORSModel.ors.StructuredGrid
getWriteToUserInfo() → bool
static get_mask_value(goldStandardStructuredGrid: ORSModel.ors.StructuredGrid, aStructuredGridtoCompare: ORSModel.ors.StructuredGrid) → int
keepAlive = False
classmethod menuItemStartPlugin()
multiple = False
removeFromObjectToCompare(objectGUID: str)
savable = False
setManagedClass(managed_class)
setMask(mask: ORSModel.ors.ROI)
setObjectToCompareGUIDList(objectToCompareGUIDList: list)
static setSavedMetricList(managedClass, metric_list, withGroundTruth=True)
setSelectedMetrics(selectedMetrics: list)
setShowGroundTruthCombobox(showGroundTruthCombobox)
setStructuredGridGroundTruth(structuredGridGroundTruth: ORSModel.ors.StructuredGrid)
setWriteToUserInfo(writeToUserInfo: bool)
classmethod startFromContextualMenu(selectedGUID_01, selectedGUID_02)