OrsHistographicSegmentation

Segmentation tool based on bidimensional analysis of data

author:ORS Team contact:http://theobjects.com email:info@theobjects.com organization:Object Research Systems (ORS), Inc. address:760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4 copyright:Object Research Systems (ORS), Inc. All rights reserved 2018. date:Dec 03 2015 11:23 dragonflyVersion:  3.0 UUID:a18c801a761411e78ddd448a5b5d70c0

Class Code

class OrsPythonPlugins.OrsHistographicSegmentation.OrsHistographicSegmentation.OrsHistographicSegmentation(varname=None, managed=True)

OrsHistographicSegmentationBrushAddOnHistogramAction()

OrsHistographicSegmentationBrushGrowInAddMode()

OrsHistographicSegmentationBrushGrowInRemoveMode()

OrsHistographicSegmentationBrushRemoveOnHistogramAction()

OrsHistographicSegmentationBrushShrinkInAddMode()

OrsHistographicSegmentationBrushShrinkInRemoveMode()

OrsStateHSBrush = 'OrsStateHistographicSegmentationBrushOnDisplay'

OrsStateHSBrushAdd = 'OrsStateHistographicSegmentationBrushAddOnDisplay'

OrsStateHSBrushAddActivation()

OrsStateHSBrushRemove = 'OrsStateHistographicSegmentationBrushRemoveOnDisplay'

OrsStateHSBrushRemoveActivation()

OrsStateHSHistogramBrush = 'OrsStateHistographicSegmentationBrushOnHistogram'

OrsStateHSHistogramBrushAdd = 'OrsStateHistographicSegmentationBrushAddOnHistogram'

OrsStateHSHistogramBrushRemove = 'OrsStateHistographicSegmentationBrushRemoveOnHistogram'

UIDescriptors = [<ORSServiceClass.OrsPlugin.uidescriptor.UIDescriptor object>]

addClass(className, alpha)

addHistogramIndexToLabel(listHistogramIndex, label, refreshPreviousLMR=True, refreshOverlay=False)

canClusteringAlgorithm(clusteringAlgorithmName)

canSegmentationAlgorithm(segmentationAlgorithmName)

closable = True

closeWidget(name)

computeHistogram()

createInRange(title, xmin, ymin, zmin, xmax, ymax, zmax, useMask, listLabels, createROI, createLMR)

createROIAndLMRToExport(axisXDataset, axisYDataset, histogramData, LMRHistogramPainting, LMRSegmentation, ROIRangeToApplySegmentation, LMRCreateSegmentationInRange, aListOfROIToExport, listLabels, LMRToExport, IProgress)

deletePlugin(aWidget=None)

draw2DBrushInDisplay(worldPos, display, remove, brushKind)

getAheadLMRHistogramPaintingGUID()

getAxisXDatasetGUID()

getAxisXDatasetTIndex()

getAxisYDatasetGUID()

getAxisYDatasetTIndex()

getBinCount()

getBrushSize()

getClassName(label)

getClusteringAlgorithmDict()

getClusteringAlgorithmsNames()

getHistogramGUID()

getIsMaskUsed()

getLMRHistogramPaintingGUID()

getLMRSegmentationGUID()

classmethod getPluginStates()

getPreviousLMRHistogramPaintingGUID()

getROIGUID()

getROIHistogramRangeGUID()

getROITIndex()

getSegmentationAlgorithmDict()

getSegmentationAlgorithmsNames()

getSobel2DAxisXDatasetGUID()

getSobel3DAxisXDatasetGUID()

growBrush()

handleChanged(oldState, newState)

This method is called when the state of the application is changed.

Parameters:

• oldState (str) – name of the old (previous) state
• newState (str) – name of the new (current) state

handleTriggered(eventdata)

This method is called on every user input (mouse move, mouse click, key press, …) when the current state of the application is one of those declared by the plugin. This method can be used to perform specific tasks even if no action is currently in progress.

Parameters:eventData (OrsEvent.eventdata.InputEventData) – the event data

importROI(importedROI, label, refreshPreviousLMR=True)

initializeBrushSize()

keepAlive = False

multiple = False

classmethod openGUI()

openWidget(name, dock=None, tab=None, x=-1, y=-1, w=-1, l=-1, order=-1)

orsDisplayUnderCursorChange()

redoLastOperationOnLMRHistogramPaintingOverlay()

refreshSegmentationPreviewArea()

removeClass(labelToRemove)

removeHistogramIndex(listHistogramIndex, label, refreshPreviousLMR=True, refreshOverlay=False)

renameClass(newClassName, label)

resetPlugin()

savable = False

setBinCount(binCount)

setBrushSize(aSizeInMeter)

setClassColor(labelIdx, orsColor)

setCursor(handleName)

Sets the current cursor

Parameters:state (str) – state associated to the cursor to set

setDatasets(axisXDatasetGUID, axisYDatasetGUID, axisXDatasetTIndex, axisYDatasetTIndex, ROIGUID, ROITIndex)

setSobel2DAxisXDatasetGUID(sobel2DAxisXDatasetGUID)

setSobel3DAxisXDatasetGUID(sobel3DAxisXDatasetGUID)

showInToolbar = True

shrinkBrush()

startUIClusteringAlgorithm(clusteringAlgorithmName, threshold)

startUISegmentationAlgorithm(segmentationAlgorithmName)

stateDescriptors = [<ORSServiceClass.OrsPlugin.statedescriptor.StateDescriptor object>, <ORSServiceClass.OrsPlugin.statedescriptor.StateDescriptor object>, <ORSServiceClass.OrsPlugin.statedescriptor.StateDescriptor object>, <ORSServiceClass.OrsPlugin.statedescriptor.StateDescriptor object>, <ORSServiceClass.OrsPlugin.statedescriptor.StateDescriptor object>, <ORSServiceClass.OrsPlugin.statedescriptor.StateDescriptor object>]

switchToHistographicSegmentationBrushAddAction()

switchToHistographicSegmentationBrushRemoveAction()

classmethod toolsMenu()

undoLastOperationOnLMRHistogramPaintingOverlay()

updateROIHistogramRange(visibility, minThresholdValue=0, maxThresholdValue=100, histogramData=[])

useSobel(datasetGUID, tStep, kernel='3D')