OrsPlugins¶

orsdicomloader¶

Imports and manages DICOM image files

Portions dcmtk

Portions OpenJPEG

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	Feb 12 2016 08:35
	3.0
UUID:	e8712846762511e790fb448a5b5d70c0

class OrsPlugins.orsdicomloader.OrsDICOMLoader(varname=None, managed=True)¶

lib = None¶

libName = 'OrsDICOMLoader.dll'¶

interfacemethod loadFiles(fileNames)¶

Loads the set of files.

Parameters:	fileNames (file) [count=[0, None]] – fully qualified file names
Returns:	output (ORSModel.ors.Group) [count=1] – Group with all datasets created

interfacemethod loadFolderContents(path, recurse=True)¶

Loads the contents of a folder.

Parameters:	path (str) – fully qualified file path recurse (bool) – True to recurse into subfolders, False to do only specified folder
Returns:	output (ORSModel.ors.Group) [count=1] – Group with all datasets created

startGui()¶

orsimageloader¶

Imports image files

Portions LIBTIFF

Portions CTK

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	Feb 23 2015 15:44
	3.0
UUID:	396311c8762611e7879a448a5b5d70c0

class OrsPlugins.orsimageloader.OrsImageLoader(varname=None, managed=True)¶

classmethod OpenUIOnRecentFileEntry(entry)¶: Helper interface to start the gui, prepopulating the files list :param entry: a saved recent file entry :return: None

classmethod StartGuiWithFiles(stringifiedFiles='')¶

createCroppedDatasetDeterminingGeometryFromFiles(fileNames, minX, maxX, minY, maxY, minZ, maxZ)¶

createCroppedDatasetDeterminingGeometryFromFolderContents(folderPath, searchFilter, minX, maxX, minY, maxY, minZ, maxZ)¶

interfacemethod createDatasetDeterminingGeometryFromFiles(fileNames)¶

Creates a dataset from a set of files.

Parameters:	fileNames (file) [count=[0, None]] – fully qualified file names
Returns:	output (ORSModel.ors.Channel) – Created dataset

createDatasetDeterminingGeometryFromFolderContents(folderPath, searchFilter)¶

interfacemethod createDatasetFromFiles(fileNames, xSize, ySize, zSize, tSize, minX, maxX, minY, maxY, minZ, maxZ, xSampling, ySampling, zSampling, tSampling, xSpacing, ySpacing, zSpacing, slope, offset, dataUnit, invertX, invertY, invertZ, axesTransformation, datasetName, convertFrom32To16bits, dataRangeMin, dataRangeMax, frameCount, additionalInfo)¶

Creates a dataset from a set of files.

Parameters:

fileNames (file) [count=[0, None]] – fully qualified file names
xSize (int) – X size
ySize (int) – Y size
zSize (int) – Z size
tSize (int) – T size
minX (int) – lower X index (for cropping)
maxX (int) – upper X index (for cropping)
minY (int) – lower Y index (for cropping)
maxY (int) – upper Y index (for cropping)
minZ (int) – lower Z index (for cropping)
maxZ (int) – upper Z index (for cropping)
xSampling (int) – sampling in X
ySampling (int) – sampling in Y
zSampling (int) – sampling in Z
tSampling (int) – sampling in T
xSpacing (float) – X spacing (in meters)
ySpacing (float) – Y spacing (in meters)
zSpacing (float) – Z spacing (in meters)
slope (float) –
offset (float) –
dataUnit (str) – unit of the data
invertX (bool) – True to invert the X axis
invertY (bool) – True to invert the Y axis
invertZ (bool) – True to invert the Z axis
axesTransformation (int) – 0-> XYZ, 1->XZY, 2->YXZ, 3->YZX, 4->ZXY, 5->ZYX
datasetName (str) – name of created dataset
convertFrom32To16bits (bool) – True to convert from 32 bits to 16
dataRangeMin (float) – minimum of data range
dataRangeMax (float) – maximum of data range
frameCount (int) – number of frames
additionalInfo (str) – an XML supplying additional model information

Returns:

output (ORSModel.ors.Channel) [count=[0, None]] – Created dataset

interfacemethod createDatasetFromRAWFiles(fileNames, xSize, ySize, zSize, tSize, type, reverseByteOrdering, signedData, dataOffset, minX, maxX, minY, maxY, minZ, maxZ, xSampling, ySampling, zSampling, tSampling, xSpacing, ySpacing, zSpacing, slope, offset, dataUnit, invertX, invertY, invertZ, axesTransformation, datasetName)¶

Creates a dataset from a set of RAW files.

Parameters:

fileNames (file) [count=[0, None]] – fully qualified file names
xSize (int) – X size
ySize (int) – Y size
zSize (int) – Z size
tSize (int) – T size
type (int) – 0->unsigned byte, 1->unsigned short, 2->unsigned int, 3->float
reverseByteOrdering (int) –
signedData (int) –
dataOffset (int) – offset into the file where the data begins (for files that have a header)
minX (int) – lower X index (for cropping)
maxX (int) – upper X index (for cropping)
minY (int) – lower Y index (for cropping)
maxY (int) – upper Y index (for cropping)
minZ (int) – lower Z index (for cropping)
maxZ (int) – upper Z index (for cropping)
xSampling (int) – sampling in X
ySampling (int) – sampling in Y
zSampling (int) – sampling in Z
tSampling (int) – sampling in T
xSpacing (float) – X spacing (in meters)
ySpacing (float) – Y spacing (in meters)
zSpacing (float) – Z spacing (in meters)
slope (float) –
offset (float) –
dataUnit (str) – unit of the data
invertX (int) – True to invert the X axis
invertY (int) – True to invert the Y axis
invertZ (int) – True to invert the Z axis
axesTransformation (int) – 0-> XYZ, 1->XZY, 2->YXZ, 3->YZX, 4->ZXY, 5->ZYX
datasetName (str) – name of created dataset

Returns:

output (ORSModel.ors.Channel) [count=[0, None]] – Created dataset

createImagesFromFiles(fileNames)¶

lib = None¶

libName = 'OrsImageLoader.dll'¶

openUIOnFiles(stringifiedFileNames)¶

openUIOnRecentFileEntry(entry)¶

populateImageFromFile(image=None, filename=None)¶

startGui()¶

classmethod startOtherLoader(pluginName)¶: Helper method to instantiate another loader plugin :param pluginName: a plugin name :return: bool

orsimagesaver¶

Exports datasets to various file formats

Portions LIBTIFF

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	May 20 2015 16:46
	3.0
UUID:	2e2f8cd2762711e79e3c448a5b5d70c0

class OrsPlugins.orsimagesaver.OrsImageSaver(varname=None, managed=True)¶

interfacemethod exportChannel(channel, fileName, extension='tif')¶

Exports a dataset to file.

Parameters:	channel (ORSModel.ors.Channel) – dataset to export fileName (file saving) – fully qualified file name extension (str) – image file format extension
Returns:	output (bool) – True or False

interfacemethod exportDatasetToFile(dataset, fileName, outputType, showProgress)¶

Exports a dataset to file.

Parameters:	dataset (str) – dataset to export fileName (str) – fully qualified file name outputType (str) – Type of file (‘raw’, ‘orsobject’, ‘hdr’) showProgress (bool) – True to show a progress bar
Returns:	output (bool) – True or False

interfacemethod exportDatasetToGDT1(dataset, fileName)¶

Exports a dataset to GDT1.

Parameters:	dataset (str) – dataset to export fileName (str) – fully qualified file name
Returns:	output (bool) – True or False

interfacemethod exportDatasetToJpegFile(dataset, fileName, imageQuality, showProgress)¶

Exports a dataset to jpeg.

Parameters:	dataset (str) – dataset to export fileName (str) – fully qualified file name imageQuality (int) – image quality of export file showProgress (bool) – True to show a progress bar
Returns:	output (bool) – True or False

interfacemethod exportDatasetToRAWFile(dataset, fileName, exportMultiFrameFile, showProgress)¶

Exports a dataset to RAW.

Parameters:	dataset (str) – dataset to export fileName (str) – fully qualified file name exportMultiFrameFile (bool) – True to export all data into one output file (multi-frame) showProgress (bool) – True to show a progress bar
Returns:	output (bool) – True or False

interfacemethod exportDatasetToTiffFile(dataset, fileName, useLZWCompression, exportMultiFrameFile, showProgress)¶

Exports a dataset to TIFF.

Parameters:	dataset (str) – dataset to export fileName (str) – fully qualified file name useLZWCompression (bool) – True to compress the output file exportMultiFrameFile (bool) – True to export all slices into one output file (multi-frame) showProgress (bool) – True to show a progress bar
Returns:	output (bool) – True or False

interfacemethod exportImageToFile(image, fileName)¶

This is the official interface to export an image (scriptable)

param image: image to export

type image: ORSModel.ors.Image

param fileName: fully qualified file name

type fileName: str

return: True or False

rtype: bool

lib = None¶

libName = 'OrsImageSaver.dll'¶

startGuiForDataset(datasetGUID)¶

orsmeshloader¶

Imports meshes from files

Portions VTK

Portions Open CASCADE

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	Nov 12 2015 14:38
	3.0
UUID:	3e44f376762711e79f3c448a5b5d70c0

class OrsPlugins.orsmeshloader.OrsMeshLoader(varname=None, managed=True)¶

classmethod OpenUIOnRecentFileEntry(entry)¶: Helper interface to start the gui, prepopulating the files list :param entry: a saved recent file entry :return: None

classmethod convertVTKToORSForLoader(outOrsMesh, vtkPolyDataAddr)¶: This method convert a vtk mesh to an ORS one. It’s a simplified call for the loader. For the full helper, please use VtkPolyDataToFromOrsMeshHelper class

lib = None¶

libName = 'OrsMeshLoader.dll'¶

interfacemethod loadMeshFromFile(filename, showProgress, progress=None)¶

Import a mesh from a file.

Parameters:	filename (file) – fully qualified file name showProgress (bool) – show a progress bar while exporting progress (ORSModel.ors.Progress) – progress bar
Returns:	output (ORSModel.ors.Mesh) – mesh created

openUIOnRecentFileEntry(entry)¶: Helper interface to start the gui, prepopulating the files list :param entry: a saved recent file entry :return: None

startGui()¶

orsmeshsaver¶

Exports meshes to various file formats

Portions VTK

Portions Open CASCADE

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	Nov 13 2015 08:34
	3.0
UUID:	64c8741e762711e7a9b1448a5b5d70c0

class OrsPlugins.orsmeshsaver.OrsMeshSaver(varname=None, managed=True)¶

interfacemethod exportMeshToFile(mesh, filename, centerAtOrigin, outputUnitID, exportAsASCII, exportColors, showProgress)¶

Exports a mesh to a file.

Parameters:	mesh (ORSModel.ors.Mesh) – source mesh filename (file saving) – fully qualified file name centerAtOrigin (bool) – center the mesh at origin or not outputUnitID (int) – output unit ID exportAsASCII (bool) – export as ASCII or binary exportColors (bool) – export colors showProgress (bool) – show a progress bar while exporting
Returns:	output (int) – Return code (0 if succeeded)

lib = None¶

libName = 'OrsMeshSaver.dll'¶

startGuiForDataset(datasetGUID)¶

classmethod writeVTKFile(vtkMesh, fileName)¶

Write a .vtk with a vtk mesh.

Returns:	output – 0 if worked, else 1

classmethod writeVTPFile(vtkMesh, fileName)¶

Write a .vtk with a vtk mesh.

Returns:	output – 0 if worked, else 1

orspreferences¶

Manages user preferences

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	Nov 15 2015 11:40
	3.0
UUID:	76e108c0762711e79e58448a5b5d70c0

class OrsPlugins.orspreferences.OrsPreferences(varname=None, managed=True)¶

lib = None¶

libName = 'OrsPreferences.dll'¶

orsqtemptyloader¶

Tool to create datasets from scratch

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	Feb 23 2015 15:44
	3.0
UUID:	8ac6fda4762711e78298448a5b5d70c0

class OrsPlugins.orsqtemptyloader.OrsQtEmptyLoader(varname=None, managed=True)¶

interfacemethod createChannel(title, dataType, sizeX, sizeY, sizeZ, sizeT, spacingX, spacingY, spacingZ, offset, slope, addNoise, gaussian, noiseStdDev, noiseRatio, initValue, progress)¶

Creates a dataset from parameters.

Parameters:

title (str) – title of the dataset
dataType (int) – data type. 0: unsigned byte; 2: unsigned short; 4: unsigned int; 6: float.
sizeX (int) – X size
sizeY (int) – Y size
sizeZ (int) – Z size
sizeT (int) – T size
spacingX (float) – X spacing (in meters)
spacingY (float) – Y spacing (in meters)
spacingZ (float) – Z spacing (in meters)
offset (float) –
slope (float) –
addNoise (bool) – if True, noise will be added
gaussian (bool) – if True, the added noise will have a gaussian distribution
noiseStdDev (float) – noise standard deviation
noiseRatio (float) – ratio of noise
initValue (float) – initial value put in each voxel
progress (str) – id of a progress object

Returns:

output (ORSModel.ors.Channel) [count=1] – Created dataset

lib = None¶

libName = 'OrsQtEmptyLoader.dll'¶

showInToolbar = True¶

startGui()¶

orsqthelp¶

Manages help

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	Jun 15 2015 11:18
	3.0
UUID:	d66b0064762711e78289448a5b5d70c0

class OrsPlugins.orsqthelp.OrsQtHelp(varname=None, managed=True)¶

lib = None¶

libName = 'OrsQtHelp.dll'¶

orsqtlayout¶

Manages the renderer and window layouts

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	Feb 23 2015 15:44
	3.0
UUID:	f3b5d226762711e78923448a5b5d70c0

class OrsPlugins.orsqtlayout.OrsQtLayout(varname=None, managed=True)¶

addMovieKeyFrame(timeFrame)¶

classmethod addMovieKeyFrameActionCall()¶

interfacemethod addMovieKeyFrameInCurrentView(timeFrame=-1)¶

Adds a key frame to the Movie Maker for the current selected view

Parameters:	timeFrame (int) – time of the new key frame. If -1, the new key frame will be appended at the end. Default: -1.

canDisplayMeshWithNumberOfTriangles(nbTriangles, bScalarMesh)¶

interfacemethod closeMovieMaker()¶: Closes the Movie Maker

deleteSelectedKeyframe()¶

classmethod deleteSelectedKeyframeInCurrentView()¶

displayCanDisplayAnotherVolume(displayGUID)¶

enableSeriesLayoutControls(bEnable)¶

forceDraw()¶: Forces a draw on the current view

getFrameForAddMovieKeyFrame()¶

getIsMovieSaverVisibleInCurrentView()¶

getProperty(visualGUID, displayGUID, propertyName)¶

isDelayRespectedToCallAddMovieKeyFrame()¶

isDelayRespectedToCallShowMovieSaver()¶

lib = None¶

libName = 'OrsQtLayout.dll'¶

interfacemethod openMovieMaker()¶: Opens the Movie Maker

pluginContainsDisplayGUID(displayGUID)¶

setAxisIndicatorIsShownInCurrentDisplay(bEnable)¶

setOrthoModeInCurrentDisplay(bUse)¶

setProperty(visualGUID, displayGUID, propertyName, value, applyToAllDisplays, logAction)¶

showMovieSaver()¶: Toggles the visibility of the Movie Maker

startServer(address, iPort)¶

toggleExclusiveMode()¶

classmethod toggleExclusiveModeInCurrentView()¶

toggleMovieSaverVisibility()¶: Toggles the visibility of the Movie Maker

classmethod toggleVisibilityMovieSaverInCurrentView()¶

orsqtmaincontext¶

Manages the main window of the application

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	Mar 30 2015 12:26
	3.0
UUID:	1234279e762811e7b42e448a5b5d70c0

class OrsPlugins.orsqtmaincontext.OrsQtMainContext(varName, pushContext=False)¶

lib = None¶

libName = 'OrsQtMainContext.dll'¶

loadFromLastAutosave()¶

classmethod loadFromLastAutosaveFor(varName)¶

loadWorkspace()¶

classmethod loadWorkspaceFor(varName)¶

loadWorkspaceFrom()¶

classmethod loadWorkspaceFromFor(varName)¶

resetWorkspace()¶

classmethod resetWorkspaceFor(varName)¶

saveWorkspace()¶

saveWorkspaceAs()¶

classmethod saveWorkspaceAsFor(varName)¶

classmethod saveWorkspaceFor(varName)¶

setState(state)¶

orsqtplugingenerator¶

Plugin used to generate the basic files of a new C++ plugins

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	Jun 01 2015 12:58
	3.0
UUID:	3683c3ca762811e79bdd448a5b5d70c0

class OrsPlugins.orsqtplugingenerator.OrsQtPluginGenerator(varname=None, managed=True)¶

lib = None¶

libName = 'OrsQtPluginGenerator.dll'¶

orsqtpluginviewer¶

Debugging tool to analyze plugin contents

dragonflyVersion:
author:	ORS Team
contact:	http://theobjects.com
email:	info@theobjects.com
organization:	Object Research Systems (ORS), Inc.
address:	760 St-Paul West, suite 101, Montréal, Québec, Canada, H3C 1M4
copyright:	Object Research Systems (ORS), Inc. All rights reserved 2018.
date:	May 15 2015 12:16
	3.0
UUID:	712dea4c762911e79a03448a5b5d70c0

class OrsPlugins.orsqtpluginviewer.OrsQtPluginViewer(varname=None, managed=True)¶

lib = None¶

libName = 'OrsQtPluginViewer.dll'¶

OrsPlugins¶

orsdicomloader¶

orsimageloader¶

orsimagesaver¶

orsmeshloader¶

orsmeshsaver¶

orspreferences¶

orsqtemptyloader¶

orsqthelp¶

orsqtlayout¶

orsqtmaincontext¶

orsqtplugingenerator¶

orsqtpluginviewer¶

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param image:	image to export
type image:	ORSModel.ors.Image
param fileName:	fully qualified file name
type fileName:	str
return:	True or False
rtype:	bool